Advancing Epigenetics Towards Systems Biology

List of EpiGeneSys publications


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Group Leader:
Nicolas Le Novere19 Publications.

2016

The systems biology format converter.

BMC Bioinformatics 2016 Apr 5;17(1):154

Rodriguez N, Pettit JB, Dalle Pezze P, Li L, Henry A, van Iersel MP, Jalowicki G, Kutmon M, Natarajan KN, Tolnay D, Stefan MI, Evelo CT, Le Novère N

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2015

The evolution of standards and data management practices in systems biology.

Mol Syst Biol 2015 Dec 23;11(12):851

Stanford NJ, Wolstencroft K, Golebiewski M, Kania R, Juty N, Tomlinson C, Owen S, Butcher S, Hermjakob H, Le Novère N, Mueller W, Snoep J, Goble C

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Mathematical Models of Pluripotent Stem Cells: At the Dawn of Predictive Regenerative Medicine.

Methods Mol Biol 2016;1386:331-50

Pir P, Le Novère N

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Enabling surface dependent diffusion in spatial simulations using Smoldyn.

BMC Res Notes 2015 Dec 8;8(1):752

Seeliger C, Le Novère N

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SBOL Visual: A Graphical Language for Genetic Designs.

PLoS Biol 2015 Dec;13(12):e1002310

Quinn JY, Cox RS 3rd, Adler A, Beal J, Bhatia S, Cai Y, Chen J, Clancy K, Galdzicki M, Hillson NJ, Le Novère N, Maheshwari AJ, McLaughlin JA, Myers CJ, P U, Pocock M, Rodriguez C, Soldatova L, Stan GB, Swainston N, Wipat A, Sauro HM

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Systems Biology Markup Language (SBML) Level 2 Version 5: Structures and Facilities for Model Definitions.

J Integr Bioinform 2015 Sep 4;12(2):271

Hucka M, Bergmann FT, Dräger A, Hoops S, Keating SM, Le Novère N, Myers CJ, Olivier BG, Sahle S, Schaff JC, Smith LP, Waltemath D, Wilkinson DJ

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The Systems Biology Markup Language (SBML) Level 3 Package: Qualitative Models, Version 1, Release 1.

J Integr Bioinform 2015 Sep 4;12(2):270

Chaouiya C, Keating SM, Berenguier D, Naldi A, Thieffry D, van Iersel MP, Le Novère N, Helikar T

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Systems Biology Graphical Notation: Activity Flow language Level 1 Version 1.2.

J Integr Bioinform 2015 Sep 4;12(2):265

Mi H, Schreiber F, Moodie S, Czauderna T, Demir E, Haw R, Luna A, Le Novère N, Sorokin A, Villéger A

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Systems Biology Graphical Notation: Entity Relationship language Level 1 Version 2.

J Integr Bioinform 2015 Sep 4;12(2):264

Sorokin A 1, Le Novère N, Luna A, Czauderna T, Demir E, Haw R, Mi H, Moodie S, Schreiber F, Villéger A

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Systems Biology Graphical Notation: Process Description language Level 1 Version 1.3.

J Integr Bioinform 2015 Sep 4;12(2):263

Moodie S, Le Novère N, Demir E, Mi H, Villéger A

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Latest publications

2017-06-27

The Histone Acetyltransferase Mst2 Protects Active Chromatin from Epigenetic Silencing by Acetylating the Ubiquitin Ligase Brl1.

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2017-05-26

Proliferation Drives Aging-Related Functional Decline in a Subpopulation of the Hematopoietic Stem Cell Compartment.

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2017-04-30

The impact of rare and low-frequency genetic variants in common disease.

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