Advancing Epigenetics Towards Systems Biology

List of EpiGeneSys publications


Information is retrieved from

pubmed

Back to the index page

Group Leader:
Marc A. Marti-Renom14 Publications.

2016

Biological insertion of computationally designed short transmembrane segments.

Sci Rep 2016 Mar 18;6:23397

Baeza-Delgado C, von Heijne G, Marti-Renom MA, Mingarro I

View on PubMed

2015

Chromatin and RNA Maps Reveal Regulatory Long Noncoding RNAs in Mouse.

Mol Cell Biol 2015 Dec 28;

Bogu GK, Vizán P, Stanton LW, Beato M, Di Croce L, Marti-Renom MA

View on PubMed

The Conformation of Yeast Chromosome III Is Mating Type Dependent and Controlled by the Recombination Enhancer.

Cell Rep 2015 Dec 1;13(9):1855-67

Belton JM, Lajoie BR, Audibert S, Cantaloube S, Lassadi I, Goiffon I, Baù D, Marti-Renom MA, Bystricky K, Dekker J

View on PubMed

Release of 50 new, drug-like compounds and their computational target predictions for open source anti-tubercular drug discovery.

PLoS One 2015;10(12):e0142293

Rebollo-Lopez MJ, Lelièvre J, Alvarez-Gomez D, Castro-Pichel J, Martínez-Jiménez F, Papadatos G, Kumar V, Colmenarejo G, Mugumbate G, Hurle M, Barroso V, Young RJ, Martinez-Hoyos M, González Del Río R, Bates RH, Lopez-Roman EM, Mendoza-Losana A, Brown JR, Alvarez-Ruiz E, Marti-Renom MA, Overington JP, Cammack N, Ballell L, Barros-Aguire D

View on PubMed

Outcome of the First wwPDB Hybrid/Integrative Methods Task Force Workshop.

Structure 2015 Jul 7;23(7):1156-67

Sali A, Berman HM, Schwede T, Trewhella J, Kleywegt G, Burley SK, Markley J, Nakamura H, Adams P, Bonvin AM, Chiu W, Peraro MD, Di Maio F, Ferrin TE, Grünewald K, Gutmanas A, Henderson R, Hummer G, Iwasaki K, Johnson G, Lawson CL, Meiler J, Marti-Renom MA, Montelione GT, Nilges M, Nussinov R, Patwardhan A, Rappsilber J, Read RJ, Saibil H, Schröder GF, Schwieters CD, Seidel CA, Svergun D, Topf M, Ulrich EL, Velankar S, Westbrook JD

View on PubMed

Restraint-based three-dimensional modeling of genomes and genomic domains.

FEBS Lett 2015 May 14;

Serra F, Di Stefano M, Spill YG, Cuartero Y, Goodstadt M, Baù D, Marti-Renom MA

View on PubMed

Ligand-target prediction by structural network biology using nAnnoLyze.

PLoS Comput Biol 2015 Mar;11(3):e1004157

Martínez-Jiménez F, Marti-Renom MA

View on PubMed

Assessing the limits of restraint-based 3D modeling of genomes and genomic domains.

Nucleic Acids Res 2015 Mar 23;

Trussart M, Serra F, Baù D, Junier I, Serrano L, Marti-Renom MA

View on PubMed

2014

Distinct structural transitions of chromatin topological domains correlate with coordinated hormone-induced gene regulation.

Genes Dev 2014 Oct 1;28(19):2151-62

Le Dily F, Baù D, Pohl A, Vicent GP, Serra F, Soronellas D, Castellano G, Wright RH, Ballare C, Filion G, Marti-Renom MA, Beato M

View on PubMed

2013

Target prediction for an open access set of compounds active against Mycobacterium tuberculosis.

PLoS Comput Biol 2013;9(10):e1003253

Martínez-Jiménez F, Papadatos G, Yang L, Wallace IM, Kumar V, Pieper U, Sali A, Brown JR, Overington JP, Marti-Renom MA

View on PubMed

Latest publications

2017-06-27

The Histone Acetyltransferase Mst2 Protects Active Chromatin from Epigenetic Silencing by Acetylating the Ubiquitin Ligase Brl1.

Read more
2017-05-26

Proliferation Drives Aging-Related Functional Decline in a Subpopulation of the Hematopoietic Stem Cell Compartment.

Read more
2017-04-30

The impact of rare and low-frequency genetic variants in common disease.

Read more